LOC103130740 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC103130740

BHLH domain-containing protein. (484 aa)

Predicted Functional Partners:

tfe3

0.902

sumo1

0.848

tfeb

0.841

ENSPFOP00000011033

0.815

ENSPFOP00000008205

0.810

mtor

0.726

ENSPFOP00000014993

0.726

mapk7

0.716

mapk1

0.716

ENSPFOP00000008202

0.716

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000008202	LOC103130740	ENSPFOP00000008202	ENSPFOP00000001442	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	BHLH domain-containing protein.	0.716
ENSPFOP00000008202	mapk1	ENSPFOP00000008202	ENSPFOP00000006223	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.901
ENSPFOP00000008202	mtor	ENSPFOP00000008202	ENSPFOP00000008461	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.813
ENSPFOP00000008202	tfe3	ENSPFOP00000008202	ENSPFOP00000007774	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Transcription factor binding to IGHM enhancer 3b.	0.716
ENSPFOP00000008202	tfeb	ENSPFOP00000008202	ENSPFOP00000030939	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Transcription factor EB.	0.710
ENSPFOP00000008205	LOC103130740	ENSPFOP00000008205	ENSPFOP00000001442	Premelanosome protein a.	BHLH domain-containing protein.	0.810
ENSPFOP00000008205	tfe3	ENSPFOP00000008205	ENSPFOP00000007774	Premelanosome protein a.	Transcription factor binding to IGHM enhancer 3b.	0.810
ENSPFOP00000008205	tfeb	ENSPFOP00000008205	ENSPFOP00000030939	Premelanosome protein a.	Transcription factor EB.	0.584
ENSPFOP00000011033	LOC103130740	ENSPFOP00000011033	ENSPFOP00000001442	Lymphoid enhancer-binding factor 1.	BHLH domain-containing protein.	0.815
ENSPFOP00000011033	tfe3	ENSPFOP00000011033	ENSPFOP00000007774	Lymphoid enhancer-binding factor 1.	Transcription factor binding to IGHM enhancer 3b.	0.815
ENSPFOP00000011033	tfeb	ENSPFOP00000011033	ENSPFOP00000030939	Lymphoid enhancer-binding factor 1.	Transcription factor EB.	0.676
ENSPFOP00000014993	LOC103130740	ENSPFOP00000014993	ENSPFOP00000001442	Kit ligand a.	BHLH domain-containing protein.	0.726
ENSPFOP00000014993	tfe3	ENSPFOP00000014993	ENSPFOP00000007774	Kit ligand a.	Transcription factor binding to IGHM enhancer 3b.	0.726
ENSPFOP00000014993	tfeb	ENSPFOP00000014993	ENSPFOP00000030939	Kit ligand a.	Transcription factor EB.	0.649
LOC103130740	ENSPFOP00000008202	ENSPFOP00000001442	ENSPFOP00000008202	BHLH domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.716
LOC103130740	ENSPFOP00000008205	ENSPFOP00000001442	ENSPFOP00000008205	BHLH domain-containing protein.	Premelanosome protein a.	0.810
LOC103130740	ENSPFOP00000011033	ENSPFOP00000001442	ENSPFOP00000011033	BHLH domain-containing protein.	Lymphoid enhancer-binding factor 1.	0.815
LOC103130740	ENSPFOP00000014993	ENSPFOP00000001442	ENSPFOP00000014993	BHLH domain-containing protein.	Kit ligand a.	0.726
LOC103130740	mapk1	ENSPFOP00000001442	ENSPFOP00000006223	BHLH domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.716
LOC103130740	mapk7	ENSPFOP00000001442	ENSPFOP00000004547	BHLH domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.716