Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r11Protein phosphatase 1, regulatory (inhibitor) subunit 11. (123 aa)    
Predicted Functional Partners:
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
   
 
 0.978
nsfl1c
NSFL1 (p97) cofactor (p47).
   
 
 0.935
ENSPFOP00000024550
Protein phosphatase 1, regulatory (inhibitor) subunit 2.
    
 
 0.933
ENSPFOP00000015687
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.932
LOC103140626
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.932
ppp1r8
Protein phosphatase 1, regulatory subunit 8b.
    
 
 0.862
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.850
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.850
LOC103152354
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.850
LOC103144960
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.850
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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