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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnb1Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)    
Predicted Functional Partners:
LOC103152523
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.993
ENSPFOP00000013338
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.982
LOC103151273
Regulator of G protein signaling 9b.
   
 0.972
LOC103133111
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.971
LOC103133111-2
Guanine nucleotide-binding protein G(t) subunit alpha-1.
   
 0.971
RHO
Rhodopsin.
    
 0.960
ENSPFOP00000017576
Rhodopsin.
    
 0.960
LOC103145048
Rhodopsin.
    
 0.960
LOC103137569
Rhodopsin.
    
 0.959
LOC103149243
Regulator of G protein signaling 9a.
   
 0.955
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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