Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001450Integrin beta; Belongs to the integrin beta chain family. (611 aa)    
Predicted Functional Partners:
ENSPFOP00000001435
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.979
vtn
Vitronectin a.
    
 0.970
LOC103139167
Vitronectin b.
    
 0.970
LOC103138264
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.963
LOC103153231
Talin 1.
   
 0.962
ENSPFOP00000003541
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.953
ENSPFOP00000004257
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.953
ENSPFOP00000010050
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.953
LOC103139150
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
    
 0.953
LOC103149891
Talin 2a.
   
 0.953
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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