STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a8Solute carrier family 38 member 8a. (445 aa)    
Predicted Functional Partners:
ENSPFOP00000019575
Ras-related GTP binding A.
   
 0.725
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.723
ENSPFOP00000008463
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.698
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.694
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.687
atp6v0d1
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.642
LOC103149692
SIN3 transcription regulator family member Ab.
    
 0.611
sin3b
SIN3 transcription regulator family member B.
    
 0.611
sin3a
SIN3 transcription regulator family member Aa.
    
 0.611
LOC103154974
Uncharacterized protein.
    
 0.600
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (30%) [HD]