Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001459F-box domain-containing protein. (527 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.931
hint3
Histidine triad nucleotide binding protein 3.
    
   0.705
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.700
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.698
ENSPFOP00000011652
Ring finger protein 7.
    
 0.612
LOC103138412
NEDD8 ubiquitin like modifier, like.
    
  0.598
dcun1d3
DCN1-like protein.
     
  0.595
cand1
Cullin-associated and neddylation-dissociated 1.
   
 
  0.584
ENSPFOP00000016657
TIP120 domain-containing protein.
   
 
  0.584
LOC103141247
COMM domain containing 4.
     
  0.569
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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