Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146383Zinc finger protein 384 like. (585 aa)    
Predicted Functional Partners:
nab1
NGFI-A binding protein 1a (EGR1 binding protein 1).
    
 0.881
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.527
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.522
LOC103136741
Uncharacterized protein.
      
 0.500
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
     
 0.482
lin28b
Lin-28 homolog B (C. elegans).
    
 
 0.474
ENSPFOP00000020721
Ribosomal RNA processing 15 homolog.
      
 0.466
ENSPFOP00000011039
Uncharacterized protein.
    
 
 0.461
mxd4
MAX dimerization protein 4.
   
 
 0.450
pex5
Peroxisomal biogenesis factor 5.
    
 
 0.449
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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