Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
napgN-ethylmaleimide-sensitive factor attachment protein, gamma b. (313 aa)    
Predicted Functional Partners:
vamp4
Vesicle-associated membrane protein 4.
   
 0.997
ENSPFOP00000011884
Neuroblastoma amplified sequence.
    
 0.995
stx8
Syntaxin 8.
   
 0.993
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.991
stx18
Syntaxin 18.
    
 0.991
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.988
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.985
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
  0.981
ENSPFOP00000002464
N-ethylmaleimide-sensitive factor attachment protein, beta b.
   
 0.979
napa
N-ethylmaleimide-sensitive factor attachment protein, alpha b.
   
0.979
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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