STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001463Hyperpolarization activated cyclic nucleotide-gated potassium channel 4. (1195 aa)    
Predicted Functional Partners:
ENSPFOP00000004784
Short stature homeobox 2.
      
 0.663
ENSPFOP00000012614
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.557
LOC103152173
Hyperpolarization activated cyclic nucleotide-gated potassium channel 5.
  
  
 
0.547
ENSPFOP00000018215
Hyperpolarization activated cyclic nucleotide-gated potassium channel 5.
  
  
 
0.547
ENSPFOP00000005719
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.546
ENSPFOP00000015932
Cyclic nucleotide-binding domain-containing protein.
  
  
 
0.546
ENSPFOP00000007038
Hyperpolarization activated cyclic nucleotide-gated potassium channel 1.
  
  
 
0.545
HCN2
Hyperpolarization activated cyclic nucleotide-gated potassium channel 2b.
  
  
 
0.544
LOC103130969
Hyperpolarization activated cyclic nucleotide-gated potassium channel 3.
  
  
 
0.543
ENSPFOP00000027463
Uncharacterized protein.
  
  
 
0.543
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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