Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10; Cadherins are calcium-dependent cell adhesion proteins. (780 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.864
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
0.849
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.808
ENSPFOP00000005687
Catenin (cadherin-associated protein), alpha 2.
    
 0.808
ENSPFOP00000005715
Uncharacterized protein.
    
 0.808
ENSPFOP00000015792
Uncharacterized protein.
    
 0.808
LOC103131252
Junction plakoglobin a.
    
 0.802
ENSPFOP00000012217
Cadherin 13, H-cadherin (heart).
     
0.792
cdh17
Cadherin 17, LI cadherin (liver-intestine).
  
  
0.791
LOC103140508
Cadherin 12, type 2a (N-cadherin 2); Cadherins are calcium-dependent cell adhesion proteins.
  
 
 
0.775
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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