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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10; Cadherins are calcium-dependent cell adhesion proteins. (780 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.730
LOC103131252
Junction plakoglobin a.
    
 0.710
LOC103135024
Uncharacterized protein.
    
 0.687
CTNND1
Catenin delta 1.
   
 0.678
LOC103132666
Catenin (cadherin-associated protein), delta 1.
   
 0.678
ARVCF
ARVCF delta catenin family member b.
   
 0.678
pak2
Non-specific serine/threonine protein kinase.
    
 0.672
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.652
ENSPFOP00000005687
Catenin (cadherin-associated protein), alpha 2.
    
 0.652
ENSPFOP00000005715
Uncharacterized protein.
    
 0.652
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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