STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx7Sorting nexin 7. (439 aa)    
Predicted Functional Partners:
LOC103133084
Sorting nexin-4-like.
  
 
 0.890
ENSPFOP00000007276
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.878
LOC103156543
PX domain-containing protein.
   
 
 0.856
ENSPFOP00000015173
PX domain-containing protein.
   
 
 0.856
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 
 0.849
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.761
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.761
ENSPFOP00000009016
Vesicle-associated membrane protein 1.
    
 0.747
ENSPFOP00000013727
Zgc:92912.
    
 0.747
vamp2
Vesicle-associated membrane protein 2.
    
 0.747
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.