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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103153801CCCTC-binding factor (zinc finger protein). (757 aa)    
Predicted Functional Partners:
LOC103135049
RAD21 cohesin complex component a.
   
 0.879
LOC103154570
RAD21 cohesin complex component.
   
 0.781
ENSPFOP00000004552
RAD21 cohesin complex component like 1.
   
 0.781
ENSPFOP00000004704
Structural maintenance of chromosomes protein.
   
 0.703
ENSPFOP00000014564
E1A binding protein p300 b.
   
 0.657
ENSPFOP00000028624
Uncharacterized protein.
   
 0.657
LOC103149566
SCD domain-containing protein.
   
 
 0.644
LOC103139933
Stromal antigen 2b.
   
 
 0.644
stag1
Stromal antigen 1a.
   
 
 0.644
ENSPFOP00000013984
Si:ch211-269e2.1.
   
 
 0.644
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.