Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001482Proteasome activator subunit 2. (251 aa)    
Predicted Functional Partners:
psme1
Proteasome activator subunit 1.
  
0.999
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.997
ENSPFOP00000017246
Proteasome subunit beta.
   
 0.993
psma5
Proteasome subunit alpha type.
   
 0.993
psmb2
Proteasome subunit beta.
   
 0.992
ENSPFOP00000008567
Proteasome subunit alpha type.
   
 0.992
psmb1
Proteasome subunit beta.
   
 0.992
ENSPFOP00000019062
Proteasome subunit alpha type.
   
 0.992
LOC103146403
Proteasome subunit beta.
   
 0.989
LOC103146405
Proteasome subunit beta 12.
   
 0.989
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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