Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001484Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
ptch1
Patched 1.
    
 0.534
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.527
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.522
bmpr2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.442
ptch2
Patched 2.
    
 0.414
FGF6
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.412
FGF6-2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.412
ENSPFOP00000009296
Fibroblast growth factor 12b; Belongs to the heparin-binding growth factors family.
    
 
 0.412
FGF14
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.412
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.401
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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