Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ap5m1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (490 aa)    
Predicted Functional Partners:
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
    
 0.991
ENSPFOP00000014522
SPG11 vesicle trafficking associated, spatacsin.
    
 
 0.982
ap5z1
Adaptor related protein complex 5 subunit zeta 1.
    
 0.958
ENSPFOP00000016423
Adaptor related protein complex 4 subunit beta 1.
    
 0.882
ENSPFOP00000016921
AP-1 complex subunit gamma.
   
 0.877
ENSPFOP00000019757
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 0.867
ap1g1
AP-1 complex subunit gamma.
   
 0.860
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.839
LOC103142983
AP complex subunit beta.
    
 0.834
LOC103151838
AP complex subunit beta.
    
 0.834
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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