Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC103139879Mitochondrial calcium uptake family, member 3b. (476 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
   
0.978
ENSPFOP00000000761
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.952
ENSPFOP00000012486
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.952
LOC103149070
MCU domain-containing protein.
    
 0.941
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.941
ENSPFOP00000022094
Mitochondrial calcium uniporter.
    
 0.941
micu2
Mitochondrial calcium uptake 2.
  
0.853
thumpd3
THUMP domain containing 3.
    
   0.822
lysmd1
LysM, putative peptidoglycan-binding, domain containing 1.
    
   0.771
ENSPFOP00000025913
Uncharacterized protein.
      
 0.652
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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