Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001500WD_REPEATS_REGION domain-containing protein. (1735 aa)    
Predicted Functional Partners:
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.975
WDR63
WD repeat domain 63.
  
 
 0.955
TTC29
Uncharacterized protein.
   
 
 0.949
LOC103144375
DUF4201 domain-containing protein.
    
 
 0.945
CFAP61
Cilia and flagella associated protein 61.
  
 
 0.940
ENSPFOP00000000686
Adenylate kinase 9.
  
 0.938
wdr66
WD repeat domain 66.
   
 0.937
ccdc96
DUF4201 domain-containing protein.
    
 0.930
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.920
ENSPFOP00000007141
MYCBP-associated, testis expressed 1.
   
 0.920
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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