Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TRMOtRNA methyltransferase O. (320 aa)    
Predicted Functional Partners:
ENSPFOP00000012101
Heat shock factor binding protein 1a.
    
   0.792
tango2
Transport and golgi organization 2 homolog (Drosophila).
     
 0.644
ENSPFOP00000017175
Cytochrome c oxidase assembly factor COX18.
      
 0.626
timm21
Translocase of inner mitochondrial membrane 21.
      
 0.622
LOC103153632
VPS37C subunit of ESCRT-I.
      
 0.608
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
      
 0.605
LOC103141352
Poly [ADP-ribose] polymerase.
    
   0.565
ENSPFOP00000021352
Poly [ADP-ribose] polymerase.
    
   0.565
LOC103131877
Uncharacterized protein.
   
   0.546
RAB14
RAB14, member RAS oncogene family.
   
   0.546
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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