Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAMP1Secretory carrier-associated membrane protein. (348 aa)    
Predicted Functional Partners:
ENSPFOP00000008750
Secretory carrier-associated membrane protein.
   
   0.801
ENSPFOP00000005257
Secretory carrier-associated membrane protein.
    
   0.795
LOC103135958
Secretory carrier-associated membrane protein.
    
   0.795
itm2b
Integral membrane protein 2Bb.
    
 
 0.655
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.572
LOC103135699
FYVE and coiled-coil domain containing 1b.
      
 0.568
LOC103142578
FYVE and coiled-coil domain containing 1a.
      
 0.568
chp1
Calcineurin-like EF-hand protein 1.
      
 0.533
LOC103152417
Vesicle-associated membrane protein 8 (endobrevin).
    
 
 0.510
ENSPFOP00000027540
V-SNARE coiled-coil homology domain-containing protein.
    
 
 0.510
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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