Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slco2b1Solute carrier organic anion transporter family member. (657 aa)    
Predicted Functional Partners:
LOC103148860
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.691
ENSPFOP00000001997
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.576
ENSPFOP00000007338
Oxytocin; Belongs to the vasopressin/oxytocin family.
     
  0.511
oxt
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
     
  0.511
ENSPFOP00000026477
annotation not available
     
  0.511
ENSPFOP00000028704
annotation not available
     
  0.511
LOC103150710
Solute carrier family 38 member 3a.
    
 
 0.505
slc16a10
Solute carrier family 16 member 10.
   
 
 0.440
ENSPFOP00000003457
Hepatocyte growth factor-regulated tyrosine kinase substrate.
     
  0.431
ENSPFOP00000007227
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
  
 0.430
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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