Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103141747Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
rbm33
RNA binding motif protein 33a.
      
 0.677
ENSPFOP00000001607
Microtubule crosslinking factor 1.
      
 0.650
aplp2
Amyloid beta (A4) precursor-like protein 2.
     
 0.569
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
     
  0.569
LOC103142587
Selectin E.
     
  0.526
nrip3
Asp_protease domain-containing protein.
      
 0.522
sytl5
Synaptotagmin-like 5.
     
 0.520
ENSPFOP00000016942
Synaptotagmin-like 4.
     
 0.520
sytl3
Uncharacterized protein.
     
 0.520
LOC103129949
Thioredoxin domain-containing protein.
     
  0.511
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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