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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103141747Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
aplp2
Amyloid beta (A4) precursor-like protein 2.
     
 0.568
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 
  0.536
LOC103136852
Protocadherin 1b.
    
  0.513
pcdh7
Protocadherin 7b.
    
  0.513
ENSPFOP00000016669
Protocadherin 7a.
    
  0.513
LOC103133924
Protocadherin 1a.
    
  0.513
ENSPFOP00000026548
Uncharacterized protein.
    
  0.513
ENSPFOP00000026986
Uncharacterized protein.
    
  0.513
LOC103140299
Amyloid beta (A4) precursor protein b.
     
 0.493
APP
Amyloid beta precursor protein.
     
 0.493
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.