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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR77WD repeat domain 77. (334 aa)    
Predicted Functional Partners:
prmt5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.999
clns1a
Chloride channel, nucleotide-sensitive, 1A.
   
 0.990
LOC103137772
FIP1 like 1b (S. cerevisiae).
   
 0.984
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.980
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.980
sympk
Symplekin.
    
 0.979
papolg
Poly(A) polymerase gamma.
   
 0.975
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.967
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.959
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.956
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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