Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155923Interferon-related developmental regulator 2. (436 aa)    
Predicted Functional Partners:
COMMD10
COMM domain containing 10.
   
 0.916
commd2
COMM domain containing 2.
    
 0.890
commd6
COMM domain containing 6.
    
 0.887
ccdc22
Coiled-coil domain containing 22.
    
 0.883
ENSPFOP00000011507
COMM domain containing 7.
   
 0.860
commd9
COMM domain containing 9.
   
 0.837
LOC103150757
Copper metabolism (Murr1) domain containing 1.
   
 0.801
ENSPFOP00000031266
Copper metabolism (Murr1) domain containing 1.
   
 0.801
ccdc93
Coiled-coil domain containing 93.
    
 
 0.774
ankmy2
Ankyrin repeat and MYND domain containing 2a.
    
 0.739
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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