Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001539Uncharacterized protein; Belongs to the DEAD box helicase family. (622 aa)    
Predicted Functional Partners:
rbm28
RNA binding motif protein 28.
   
 
 0.979
ENSPFOP00000006424
EBNA1 binding protein 2.
   
 0.978
wdr74
WD repeat domain 74.
   
 
 0.977
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.973
LOC103147165
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.972
rbm34
Uncharacterized protein.
   
 0.971
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.971
ENSPFOP00000019162
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.970
cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.969
ddx54
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
  
 
0.969
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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