STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001547Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
LOC103136472
Coiled-coil domain containing 114.
   
  
 0.669
ENSPFOP00000017345
Neuritin 1a.
      
 0.554
LOC103144737
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.501
ENSPFOP00000019089
Cornichon family AMPA receptor auxiliary protein 2.
      
 0.499
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.482
LOC103130870
Uncharacterized protein.
      
 0.470
cplx3
Complexin 3b.
      
 0.463
ppid
Peptidylprolyl isomerase D.
      
 0.457
ENSPFOP00000018555
Uncharacterized protein.
      
 0.439
LOC103147859
Si:dkeyp-59c12.1.
      
 0.412
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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