Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
utp4UTP4 small subunit processome component. (688 aa)    
Predicted Functional Partners:
wdr75
WD repeat domain 75.
   
 0.999
wdr36
WD repeat domain 36.
   
 0.999
heatr1
HEAT repeat containing 1.
   
 0.999
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.999
tbl3
Transducin (beta)-like 3.
   
 0.999
wdr43
WD repeat domain 43.
   
 0.999
ENSPFOP00000011963
WD repeat domain 46.
   
 0.999
ENSPFOP00000014553
UTP15 small subunit processome component.
   
 0.999
LOC103139206
PWP2 small subunit processome component.
   
 0.999
ENSPFOP00000018045
WD repeat domain 3.
   
 0.999
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.