STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
utp4UTP4 small subunit processome component. (688 aa)    
Predicted Functional Partners:
ENSPFOP00000000131
Fibrillarin.
   
 0.999
wdr75
WD repeat domain 75.
   
 0.999
wdr36
WD repeat domain 36.
   
 0.999
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.999
ENSPFOP00000003915
UTP20 small subunit processome component.
   
 0.999
ENSPFOP00000004136
NOP58 ribonucleoprotein homolog (yeast).
   
 0.999
nol6
Nucleolar protein 6.
   
 0.999
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.999
pdcd11
Programmed cell death 11.
   
 0.999
heatr1
HEAT repeat containing 1.
   
 0.999
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.