STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef39Rho guanine nucleotide exchange factor (GEF) 39. (414 aa)    
Predicted Functional Partners:
dolk
Dolichol kinase.
    
 0.689
LOC103142507
Phospholipase A2, group XV.
    
 0.626
LOC103142508
Lecithin-cholesterol acyltransferase.
    
 0.626
LOC103132369
Monoacylglycerol O-acyltransferase 3a.
    
 0.592
LOC103145629
Monoacylglycerol O-acyltransferase 3b.
    
 0.592
ENSPFOP00000014558
Monoacylglycerol O-acyltransferase 2.
    
 0.592
ENSPFOP00000014656
Diacylglycerol O-acyltransferase 2.
    
 0.592
DGAT1
O-acyltransferase.
    
 0.574
soat1
O-acyltransferase.
    
 0.574
soat2
O-acyltransferase.
    
 0.574
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.