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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001562Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (338 aa)    
Predicted Functional Partners:
ENSPFOP00000008205
Premelanosome protein a.
   
  
 0.677
ENSPFOP00000017343
Guided entry of tail-anchored proteins factor 4.
    
   0.657
TYRP1
Tyrosinase related protein 1.
   
  
 0.650
tyr
Tyrosinase.
   
  
 0.646
ENSPFOP00000014263
Oculocutaneous albinism II.
  
  
 0.636
ENSPFOP00000006457
Tetraspanin.
   
  
 0.600
MLANA
Uncharacterized protein.
   
  
 0.572
TYR
Tyrosinase.
   
  
 0.571
ENSPFOP00000016225
Tyrosinase-related protein 1b.
   
  
 0.567
ENSPFOP00000003926
Solute carrier family 45 member 2.
   
  
 0.554
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.