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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d15TBC1 domain family, member 15. (654 aa)    
Predicted Functional Partners:
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.961
ENSPFOP00000012440
Zgc:92606.
   
 0.929
gabarapl2
GABA(A) receptor-associated protein like 2.
   
 0.928
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.928
LOC103145773
RAB7a, member RAS oncogene family.
    
 0.923
LOC103143223
Uncharacterized protein.
    
 0.923
tbc1d17
TBC1 domain family, member 17.
  
  
0.917
LOC103147350
Si:dkey-13a21.4.
     
 0.903
armc5
Armadillo repeat containing 5.
   
 0.754
LOC103135635
RAB9B, member RAS oncogene family.
   
 0.706
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.