Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d15TBC1 domain family, member 15. (654 aa)    
Predicted Functional Partners:
LOC103145773
RAB7a, member RAS oncogene family.
    
 0.969
LOC103143223
Uncharacterized protein.
    
 0.969
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.949
LOC103147350
Si:dkey-13a21.4.
     
 0.935
tbc1d17
TBC1 domain family, member 17.
  
  
 
0.903
optn
Optineurin.
   
 0.848
armc5
Armadillo repeat containing 5.
   
 0.675
LOC103135635
RAB9B, member RAS oncogene family.
   
 0.675
ENSPFOP00000020269
Uncharacterized protein.
   
 0.675
RAB9A
RAB9A, member RAS oncogene family.
   
 0.675
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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