STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001577PH domain-containing protein. (134 aa)    
Predicted Functional Partners:
ENSPFOP00000019575
Ras-related GTP binding A.
    
 
 0.617
ENSPFOP00000000761
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.579
ENSPFOP00000012486
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.579
LOC103149070
MCU domain-containing protein.
    
 0.566
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.566
ENSPFOP00000022094
Mitochondrial calcium uniporter.
    
 0.566
ENSPFOP00000016945
Regulatory associated protein of MTOR, complex 1.
    
 
 0.563
micu1
Mitochondrial calcium uptake 1.
   
 0.553
micu2
Mitochondrial calcium uptake 2.
   
 0.553
nanp
N-acetylneuraminic acid phosphatase.
      
 0.499
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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