Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPDZMultiple PDZ domain crumbs cell polarity complex component. (2030 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
   
 0.990
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
   
 0.990
ENSPFOP00000004438
Angiomotin.
    
 0.975
amotl2
Angiomotin like 2a.
   
 0.926
ENSPFOP00000007523
Angiomotin like 2b.
   
 0.926
ENSPFOP00000005593
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
    
 
 0.766
ubb
Ubiquitin B.
    
  0.709
rps27a
Ribosomal protein S27a.
    
  0.684
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.682
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.682
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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