STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cul5Cullin 5; Belongs to the cullin family. (792 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.992
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.992
ENSPFOP00000011652
Ring finger protein 7.
    
 0.988
LOC103138412
NEDD8 ubiquitin like modifier, like.
    
 0.985
cops5
COP9 signalosome subunit 5.
    
 0.976
LOC103129977
Suppressor of cytokine signaling 2.
   
 0.975
ELOB
Elongin B.
    
 0.972
ENSPFOP00000013383
Elongin B.
    
 0.972
asb1
Ankyrin repeat and SOCS box containing 1.
    
 0.968
asb7
Ankyrin repeat and SOCS box containing 7.
    
 0.962
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.