Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gdap1l1Ganglioside induced differentiation associated protein 1-like 1. (366 aa)    
Predicted Functional Partners:
LOC103137967
Uncharacterized protein.
     
 0.767
pex16
Peroxisomal membrane protein PEX16.
     
 0.751
ENSPFOP00000000505
ATPase family AAA domain containing 1b; Belongs to the AAA ATPase family.
     
 0.669
LOC103141351
ATPase family AAA domain containing 1a; Belongs to the AAA ATPase family.
     
 0.669
ENSPFOP00000026787
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.661
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.659
GHITM
Growth hormone inducible transmembrane protein; Belongs to the BI1 family.
      
 0.591
fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.590
mfn2
Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.572
LOC103145651
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.568
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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