Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPFOP00000001595Nuclear receptor subfamily 5, group A, member 5. (534 aa)    
Predicted Functional Partners:
tnfaip6
Tumor necrosis factor, alpha-induced protein 6.
      
 0.611
ENSPFOP00000004987
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.603
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.603
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.603
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
    
 0.582
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
 0.556
ncoa1
Nuclear receptor coactivator 1.
    
 0.556
LOC103136619
Aryl hydrocarbon receptor nuclear translocator.
    
 0.556
ENSPFOP00000007121
Nuclear receptor coactivator 3.
    
 0.556
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.556
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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