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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103143722Heme-binding protein soul5. (218 aa)    
Predicted Functional Partners:
pdcd6
Programmed cell death 6.
    
   0.715
pef1
Penta-EF-hand domain containing 1.
    
   0.715
ENSPFOP00000002370
BH4_2 domain-containing protein.
   
 
 0.690
BCL2L1
BCL2 like 1.
   
 
 0.690
LOC103129389
Uncharacterized protein.
    
   0.482
bok
BCL2 family apoptosis regulator BOK a.
    
   0.482
LOC103129193
MCL1 apoptosis regulator, BCL2 family member b.
    
   0.482
LOC103150954
Zgc:153993.
    
   0.482
LOC103143059
BCL2 family apoptosis regulator BOK b.
    
   0.482
BAX
BCL2 associated X, apoptosis regulator.
    
   0.482
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.