Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPFOP00000001601Calsyntenin 1. (839 aa)    
Predicted Functional Partners:
LOC103140299
Amyloid beta (A4) precursor protein b.
   
 
 0.665
APP
Amyloid beta precursor protein.
   
 
 0.665
klc2
TPR_REGION domain-containing protein.
    
 
 0.593
klc1
Kinesin light chain 1a.
    
 
 0.593
klc3
Kinesin light chain 3.
    
 
 0.593
klc4
TPR_REGION domain-containing protein.
    
 
 0.593
aplp2
Amyloid beta (A4) precursor-like protein 2.
   
 
 0.588
LOC103139424
Amyloid beta (A4) precursor protein-binding, family A, member 2b.
    
 
 0.545
LOC103155697
Amyloid beta (A4) precursor protein-binding, family A, member 2a.
    
 
 0.545
LOC103154526
Amyloid beta (A4) precursor protein-binding, family A, member 1b.
    
 
 0.545
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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