Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001603Vitamin D receptor b. (430 aa)    
Predicted Functional Partners:
ENSPFOP00000017719
Nuclear receptor corepressor 2.
    
 0.787
ENSPFOP00000018817
Nuclear receptor corepressor 1.
    
 0.787
RXRB
Retinoid X receptor beta.
   
 0.767
LOC103150406
Retinoid x receptor, beta b.
   
 0.767
rxra
Retinoid X receptor, alpha a.
   
 0.767
LOC103142585
Uncharacterized protein.
   
 0.767
LOC103147619
Nuclear receptor subfamily 1, group D, member 4b.
   
 0.744
LOC103152850
Nuclear receptor subfamily 1, group D, member 2a.
   
 0.744
ncoa1
Nuclear receptor coactivator 1.
    
 0.744
nr1d2
Nuclear receptor subfamily 1, group D, member 2b.
   
 0.744
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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