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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sema4cUncharacterized protein; Belongs to the semaphorin family. (861 aa)    
Predicted Functional Partners:
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.714
mst1r
Macrophage stimulating 1 receptor b.
    
 0.707
LOC103150629
MET proto-oncogene, receptor tyrosine kinase.
    
 0.707
LOC103137246
Macrophage stimulating 1 receptor a.
    
 0.707
met
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.707
plxnb1
Plexin b1b.
    
0.662
ENSPFOP00000002968
Plexin b1a.
    
0.662
ENSPFOP00000010469
Plexin b2b.
    
 0.662
ENSPFOP00000012607
Plexin B3.
    
 0.662
LOC103154038
Plexin B2.
    
 0.662
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.