Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
jph2Junctophilin 2. (806 aa)    
Predicted Functional Partners:
ENSPFOP00000015912
WD repeat domain 90.
    
 0.770
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.768
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.684
ENSPFOP00000005970
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.608
LOC103136325
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.608
LOC103135347
Uncharacterized protein.
   
 0.608
ENSPFOP00000002482
NYD-SP28 domain-containing protein.
   
 
 0.591
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.579
ENSPFOP00000013001
Dynein, axonemal, light intermediate chain 1.
   
 
 0.574
LOC103144375
DUF4201 domain-containing protein.
   
   0.570
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.