Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
DSC1Desmocollin 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (897 aa)    
Predicted Functional Partners:
LOC103131252
Junction plakoglobin a.
   
 0.996
ENSPFOP00000016630
Uncharacterized protein.
   
 0.972
PKP1
Plakophilin 1.
   
 0.897
LOC103134601
Plakophilin 1b.
   
 0.897
LOC103135024
Uncharacterized protein.
   
 0.883
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.883
perp
P53 apoptosis effector related to pmp22.
   
 
 0.874
ENSPFOP00000000632
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.855
LOC103143006
Uncharacterized protein.
   
 0.855
ENSPFOP00000029272
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.855
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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