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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001640Neurocan b. (1312 aa)    
Predicted Functional Partners:
ENSPFOP00000028219
Uncharacterized protein.
    
  0.670
lgmn
Legumain.
   
 
 0.666
tnn
Tenascin N.
    
 0.658
ENSPFOP00000007808
Uncharacterized protein.
   
0.619
ENSPFOP00000018315
Brevican.
   
0.619
ENSPFOP00000005764
Zgc:152904.
   
 0.616
ENSPFOP00000006069
Neural cell adhesion molecule 1b.
   
 0.616
ENSPFOP00000016545
Neural cell adhesion molecule 1a.
   
 0.616
ENSPFOP00000018953
Neural cell adhesion molecule 3.
   
 0.616
ENSPFOP00000011933
Rhomboid, veinlet-like 3 (Drosophila).
   
  0.600
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.