Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001640Neurocan b. (1312 aa)    
Predicted Functional Partners:
ENSPFOP00000007808
Uncharacterized protein.
   
 0.843
ENSPFOP00000018315
Brevican.
   
 0.843
ENSPFOP00000001843
Protein tyrosine phosphatase receptor type Z1a.
   
 
 0.817
LOC103151519
Protein tyrosine phosphatase receptor type Z1b.
   
 
 0.817
ENSPFOP00000005404
Oligodendrocyte myelin glycoprotein b.
   
 
 0.766
LOC103133941
Uncharacterized protein.
   
 
 0.766
LYPD6
LY6/PLAUR domain containing 6.
    
 0.751
angptl5
Angiopoietin-like 5.
    
 0.734
ENSPFOP00000012638
Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.
    
 
 0.713
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.710
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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