Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001648Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. (411 aa)    
Predicted Functional Partners:
ENSPFOP00000000822
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.864
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
   
 
 0.852
faf2
Fas associated factor family member 2.
    
  0.805
ENSPFOP00000017355
NudC domain containing 1.
    
   0.805
LOC103147664
OS9 endoplasmic reticulum lectin.
    
 
 0.780
erlec1
Endoplasmic reticulum lectin 1.
    
 
 0.780
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.755
ENSPFOP00000004953
SPARC-like 1.
   
 
 0.752
LOC103136570
Malate dehydrogenase.
    
   0.746
MDH2
Malate dehydrogenase, mitochondrial.
    
   0.746
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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