STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001648Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. (411 aa)    
Predicted Functional Partners:
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.716
ENSPFOP00000000822
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.686
ENSPFOP00000015421
Collagen, type VI, alpha 1.
   
 0.656
ENSPFOP00000014214
VWFA domain-containing protein.
    
 0.644
LOC103142050
Fibrillar collagen NC1 domain-containing protein.
    
 0.615
ENSPFOP00000004819
Fibrillar collagen NC1 domain-containing protein.
    
 0.615
ENSPFOP00000005476
Fibrillar collagen NC1 domain-containing protein.
    
 0.615
ENSPFOP00000010173
Uncharacterized protein.
    
  0.596
LOC103133539
Uncharacterized protein.
    
  0.596
ENSPFOP00000027126
Uncharacterized protein.
    
  0.596
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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