Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103134210Vang-like protein. (539 aa)    
Predicted Functional Partners:
DVL1
Dishevelled segment polarity protein 1.
    
 0.970
LOC103147008
Dishevelled segment polarity protein 3a.
    
 0.970
ENSPFOP00000010227
Uncharacterized protein.
    
 0.970
dvl2
Dishevelled segment polarity protein 2.
    
 0.970
prickle2
Prickle homolog 2b.
    
 0.849
ENSPFOP00000004140
Prickle homolog 3.
    
 0.835
LOC103145047
Prickle homolog 2a.
    
 0.835
LOC103156826
Prickle homolog 1b.
    
 0.835
PRICKLE1
Prickle homolog 1a.
    
 0.828
ENSPFOP00000003910
annotation not available
    
 0.714
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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