Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
helz2Uncharacterized protein. (2342 aa)    
Predicted Functional Partners:
exosc10
Exosome component 10.
  
 0.963
ENSPFOP00000003353
Mtr4 exosome RNA helicase.
   
 0.956
exosc5
Exosome component 5.
  
 0.956
exosc7
Exosome component 7.
   
 0.948
exosc1
Exosome component 1.
   
 0.945
exosc9
Exosome component 9.
   
 0.944
xrn1
5'-3' exoribonuclease 1.
   
 0.941
exosc3
Exosome component 3.
   
 0.940
ENSPFOP00000019946
Exosome component 2.
   
 0.937
c1d
C1D nuclear receptor corepressor.
   
 0.934
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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