Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
traf7TNF receptor-associated factor 7. (690 aa)    
Predicted Functional Partners:
ENSPFOP00000004198
Baculoviral IAP repeat containing 6.
    
 0.917
ENSPFOP00000015763
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.914
ENSPFOP00000003361
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.891
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.891
LOC103140402
Mitogen-activated protein kinase kinase kinase 22.
    
 0.875
ENSPFOP00000014096
Mitogen-activated protein kinase kinase kinase 3.
    
 0.875
ENSPFOP00000017888
Mitogen-activated protein kinase kinase kinase 2.
    
 0.875
zfand4
Zinc finger, AN1-type domain 4.
    
 0.870
ENSPFOP00000013916
Tonsoku-like, DNA repair protein.
    
 0.861
LOC103137344
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.861
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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