Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103155845Protein kinase domain-containing protein. (430 aa)    
Predicted Functional Partners:
LOC103153544
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.994
LOC103139869
Calcium binding protein 39, like 1.
    
 0.972
cab39
Calcium binding protein 39.
    
 0.972
LOC103147137
Calcium binding protein 39-like.
    
 0.972
prkaa1
Non-specific serine/threonine protein kinase.
    
0.963
prkaa2
Non-specific serine/threonine protein kinase.
    
0.963
ENSPFOP00000014256
STE20 related adaptor alpha.
  
  
 
0.902
sec61g
SEC61 translocon gamma subunit.
   
 
 0.857
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.850
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.843
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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