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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sncbBeta-synuclein; Belongs to the synuclein family. (117 aa)    
Predicted Functional Partners:
sncg
Gamma-synuclein; Belongs to the synuclein family.
   
 
0.577
ENSPFOP00000024211
Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family.
   
 
0.577
LOC103142753
Uncharacterized protein; Belongs to the synuclein family.
   
 
0.567
ENSPFOP00000006166
Unc-5 netrin receptor A.
   
  
 0.523
slc30a9
Solute carrier family 30 member 9.
      
 0.517
cplx2
Complexin 2.
   
  
 0.516
ENSPFOP00000004677
HIG1 hypoxia inducible domain family, member 2A.
      
 0.505
LOC103151103
Microtubule-associated protein.
   
  
 0.500
LOC103149192
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.487
ENSPFOP00000003278
Glutaredoxin and cysteine rich domain containing 1 a.
      
 0.483
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.