STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc4a11Solute carrier family 4 member 11. (828 aa)    
Predicted Functional Partners:
kctd2
Potassium channel tetramerization domain containing 2.
   
 0.659
ENSPFOP00000001403
Potassium voltage-gated channel, KQT-like subfamily, member 3; Belongs to the potassium channel family.
      
 0.508
kctd5
Potassium channel tetramerization domain containing 5a.
      
 0.508
COL21A1
Collagen type XXI alpha 1 chain.
      
 0.491
slc26a2
Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
     
 0.487
arhgap1
Uncharacterized protein.
     
 0.487
LOC103141139
Solute carrier family 26 member 10.
     
 0.484
ENSPFOP00000030423
STAS domain-containing protein.
     
 0.484
ENSPFOP00000003361
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.466
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.466
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.