Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc4a11Solute carrier family 4 member 11. (828 aa)    
Predicted Functional Partners:
cyyr1
Cysteine/tyrosine-rich 1.
      
 0.638
bsnd
Uncharacterized protein.
      
 0.547
agtpbp1
ATP/GTP binding protein 1.
      
 0.518
ENSPFOP00000001276
Collagen, type VIII, alpha 2.
      
 0.500
ENSPFOP00000015908
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.459
tsen15
TSEN15 tRNA splicing endonuclease subunit.
      
 0.457
ENSPFOP00000001651
Lipoxygenase homology domains 1a.
      
 0.425
ENSPFOP00000007212
Lipoxygenase homology domains 1b.
      
 0.425
LOXHD1
Lipoxygenase homology domains 1.
      
 0.425
ENSPFOP00000000372
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.415
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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