Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001674Cell division cycle associated 5. (248 aa)    
Predicted Functional Partners:
ENSPFOP00000004704
Structural maintenance of chromosomes protein.
   
 0.978
ENSPFOP00000003545
WAPL cohesin release factor b.
    
 0.954
wapl
WAPL cohesin release factor a.
    
 0.954
pds5a
PDS5 cohesin associated factor A.
    
 0.942
pds5b
PDS5 cohesin associated factor B.
    
 0.931
smc1a
Structural maintenance of chromosomes protein.
   
 0.916
LOC103147589
Structural maintenance of chromosomes protein.
   
 0.916
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
  
 0.887
cdca8
Cell division cycle associated 8.
   
  
 0.868
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.845
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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