Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zfhx3Zinc finger homeobox 3. (3868 aa)    
Predicted Functional Partners:
LOC103153586
Runt-related transcription factor.
     
 0.678
LOC103130586
Runt-related transcription factor.
     
 0.672
ENSPFOP00000016177
Runt-related transcription factor.
     
 0.672
ENSPFOP00000001160
Mediator complex subunit 12.
      
 0.624
LOC103138264
Transforming growth factor beta; Belongs to the TGF-beta family.
    
  0.620
ENSPFOP00000013771
Runt domain-containing protein.
     
 0.585
atxn7
Ataxin 7.
      
 0.497
ATXN7L1
Ataxin 7 like 1.
      
 0.497
LOC103138792
Ataxin 3.
      
 0.470
bend3
Uncharacterized protein.
    
  0.435
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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